Package: PRC 2.0.4
PRC: Principal Response Curves (PRC) For Displaying Multivariate Main Effects And Interactions
PRC is a small \code{vegan}- and \code{LMMsolver}-based package to create and display Principal Response Curves (PRC) and smooth Principal Response Curves (PRC). PRC is a special case of Redundancy Analysis (rda) for multivariate responses in designed experiments and repeated measurement designs. PRC expresses ordination scores as deviation from a reference, usually to visualize multivariate A-dependent effects (e.g time-dependent effects) of a treatment B in (un)balanced factorial experiments. The main user functions are \code{\link{doPRC}}, \code{\link{plotPRC}}, \code{\link{plotPRC2d}} and \code{\link{smoothPRC}}. The easiest example is the code demo \code{PRC_pyrifos}. This version includes smoothPRC (\code{\link{smoothPRC}} using \code{\link{set_smoothPRC_model}}).
Authors:
PRC_2.0.4.tar.gz
PRC_2.0.4.zip(r-4.7-x86_64)PRC_2.0.4.zip(r-4.7-arm64)PRC_2.0.4.zip(r-4.6-x86_64)PRC_2.0.4.zip(r-4.6-arm64)PRC_2.0.4.zip(r-4.5-x86_64)
PRC_2.0.4.tgz(r-4.6-x86_64)PRC_2.0.4.tgz(r-4.6-arm64)PRC_2.0.4.tgz(r-4.5-x86_64)PRC_2.0.4.tgz(r-4.5-arm64)
PRC_2.0.4.tar.gz(r-4.7-arm64)PRC_2.0.4.tar.gz(r-4.7-x86_64)PRC_2.0.4.tar.gz(r-4.6-arm64)PRC_2.0.4.tar.gz(r-4.6-x86_64)
PRC_2.0.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
PRC/json (API)
| # Install 'PRC' in R: |
| install.packages('PRC', repos = c('https://cajoterbraak.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/cajoterbraak/prc/issues
- biomonitoring - Biomonitoring example from van den Brink et al.
- CPFNUTphytoplankton - Phytoplankon data from the chlorpyrifos-nutrient
- Ossenkampen - Data from Ossenkampen experiment
- SimData - Simulated data from Fig. 1 of ter Braak
Last updated from:afecef117f. Checks:15 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 145 | ||
| linux-devel-x86_64 | OK | 143 | ||
| source / vignettes | OK | 213 | ||
| linux-release-arm64 | OK | 204 | ||
| linux-release-x86_64 | OK | 139 | ||
| macos-release-arm64 | OK | 179 | ||
| macos-release-x86_64 | OK | 420 | ||
| macos-oldrel-arm64 | OK | 169 | ||
| macos-oldrel-x86_64 | OK | 286 | ||
| windows-devel-arm64 | OK | 280 | ||
| windows-devel-x86_64 | OK | 138 | ||
| windows-release-arm64 | OK | 264 | ||
| windows-release-x86_64 | OK | 144 | ||
| windows-oldrel-x86_64 | OK | 162 | ||
| wasm-release | OK | 94 |
Exports:doPRCfit_full_model_columnsfit_full_model_rowsfit_null_model_columnsfit_null_model_rowsfvalues4levelsget_focal_and_conditioning_factorsinitialize_pwr_algplot_sample_scores_cdtplot_smoothPRC_cdtplot_species_scores_2dplot_species_scores_bkplotPRCplotPRC2dplotsmoothPRCPRC_scoresrdacca_taxon_statsset_smoothPRC_modelsmoothPRCupdate_fit_state
Dependencies:cliclustercpp11dotCall64dplyrfarvergenericsggplot2ggrepelgluegridExtragtableisobandlabelinglatex2explatticelifecycleLMMsolvermagrittrMASSMatrixmgcvnlmepermutepillarpkgconfigR6RColorBrewerRcpprlangS7scalesspamtibbletidyselectutf8vctrsveganviridisLitewithr